Package: fiber 0.1.2
fiber: S7 Data Structures for Diffusion MRI Tractography
Provides three S7 classes — streamline, bundle, and bundle_set — for representing diffusion MRI tractography data in R, together with a concise set of methods for computing shape descriptors (arc-length, curvature, torsion, sinuosity), the Hausdorff distance between streamlines, arc-length reparametrization of streamlines and bundles onto uniform grids, combination of streamlines or bundles into a single bundle, combination of bundles from multiple subjects or sessions into a bundle_set, and coercion to and from the dwiFiber S4 class of the 'dti' package. See Dell'Acqua, F., Descoteaux, M. and Leemans, A. (2024) "Handbook of Diffusion MR Tractography" <doi:10.1016/C2018-0-02520-7> for more about the mathematical and computational underpinnings of diffusion MRI tractography.
Authors:
fiber_0.1.2.tar.gz
fiber_0.1.2.zip(r-4.7)fiber_0.1.2.zip(r-4.6)fiber_0.1.2.zip(r-4.5)
fiber_0.1.2.tgz(r-4.6-x86_64)fiber_0.1.2.tgz(r-4.6-arm64)fiber_0.1.2.tgz(r-4.5-x86_64)fiber_0.1.2.tgz(r-4.5-arm64)
fiber_0.1.2.tar.gz(r-4.7-arm64)fiber_0.1.2.tar.gz(r-4.7-x86_64)fiber_0.1.2.tar.gz(r-4.6-arm64)fiber_0.1.2.tar.gz(r-4.6-x86_64)
fiber_0.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
fiber/json (API)
NEWS
| # Install 'fiber' in R: |
| install.packages('fiber', repos = c('https://tractoverse.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/tractoverse/fiber/issues
Pkgdown/docs site:https://tractoverse.github.io
Last updated from:afd0a17df1. Checks:13 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | OK | 118 | ||
| linux-devel-x86_64 | OK | 140 | ||
| source / vignettes | OK | 159 | ||
| linux-release-arm64 | OK | 126 | ||
| linux-release-x86_64 | OK | 112 | ||
| macos-release-arm64 | OK | 115 | ||
| macos-release-x86_64 | OK | 180 | ||
| macos-oldrel-arm64 | OK | 92 | ||
| macos-oldrel-x86_64 | OK | 231 | ||
| windows-devel | OK | 90 | ||
| windows-release | OK | 88 | ||
| windows-oldrel | OK | 100 | ||
| wasm-release | OK | 103 |
Exports:add_shape_descriptorsas_bundleas_bundle_setas_dwifiberas_streamlinebind_bundle_setsbind_bundlesbundlebundle_setcompute_hausdorff_distanceget_curvatureget_curvilinear_lengthget_euclidean_lengthget_sinuosityget_torsionis_bundleis_bundle_setis_streamlinereparametrizestreamline
